STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ35504.1ABC-2 type transport system ATP-binding protein. (890 aa)    
Predicted Functional Partners:
SDJ35485.1
ABC-2 type transport system permease protein.
 
  0.978
SDJ11349.1
ABC-2 type transport system permease protein.
  
  0.789
purE
5-(carboxyamino)imidazole ribonucleotide mutase; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR).
       0.773
purK
5-(carboxyamino)imidazole ribonucleotide synthase; Catalyzes the ATP-dependent conversion of 5-aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5-carboxyaminoimidazole ribonucleotide (N5-CAIR).
       0.773
SDI89018.1
ABC-2 type transport system permease protein.
  
  0.762
SDJ46398.1
ATP-binding cassette, subfamily C, CydCD.
  
 
  0.640
SDI84128.1
ATP-binding cassette, subfamily B.
 
 
0.614
SDJ13638.1
Polyketide cyclase / dehydrase and lipid transport.
  
     0.607
SDI92601.1
Hypothetical protein.
  
     0.584
SDJ30993.1
Peptidase S24-like; Belongs to the peptidase S24 family.
  
     0.583
Your Current Organism:
Frankineae bacterium MT45
NCBI taxonomy Id: 1882833
Other names: F. bacterium MT45
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