STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ35893.1Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain. (391 aa)    
Predicted Functional Partners:
xylA
Xylose isomerase; Belongs to the xylose isomerase family.
 
  
 0.905
xylB
Xylulokinase.
 
  
 0.777
SDJ10358.1
Glucan 1,4-alpha-glucosidase.
  
 
  0.667
SDI82868.1
Glycosyltransferase, GT2 family.
    
 0.665
SDJ20757.1
Transketolase; Belongs to the transketolase family.
  
 
 0.647
pgi
Glucose-6-phosphate isomerase; Belongs to the GPI family.
    
 0.647
SDI76043.1
N-acetylglucosamine 6-phosphate deacetylase.
 
 0.641
tal
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 2 subfamily.
  
 
 0.633
SDI97464.1
Aldose 1-epimerase.
    
 0.627
SDI89520.1
Phosphoglucomutase; Manually curated.
     
 0.615
Your Current Organism:
Frankineae bacterium MT45
NCBI taxonomy Id: 1882833
Other names: F. bacterium MT45
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