STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ38431.1Transcriptional regulator, GntR family. (240 aa)    
Predicted Functional Partners:
SDJ38418.1
Glutamine synthetase.
 
  
 0.881
SDJ38455.1
Putative glutamine amidotransferase.
 
     0.843
SDJ38370.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
 
 
  0.825
SDJ51633.1
Transcriptional regulator, GntR family.
  
  
 0.744
SDJ24921.1
acetyl-CoA carboxylase carboxyl transferase subunit beta.
  
  
 0.724
SDI76223.1
Transcriptional regulator, GntR family.
  
    0.696
SDJ37166.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE.
    
  0.688
SDJ37667.1
Ferredoxin-NADP reductase.
    
  0.688
SDJ38385.1
Acyl-CoA reductase; Non-canonical start codon; manually curated; Belongs to the aldehyde dehydrogenase family.
 
  
  0.657
SDJ25394.1
Transcriptional regulator, GntR family.
  
    0.639
Your Current Organism:
Frankineae bacterium MT45
NCBI taxonomy Id: 1882833
Other names: F. bacterium MT45
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.