STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ39235.1acyl-CoA dehydrogenase. (396 aa)    
Predicted Functional Partners:
SDI77132.1
Phthiocerol/phenolphthiocerol synthesis type-I polyketide synthase D.
  
 0.925
SDJ29178.1
Electron transfer flavoprotein alpha subunit apoprotein.
 
  0.918
SDJ27888.1
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase.
  
 0.875
SDJ39211.1
Protein of unknown function.
 
  0.863
SDJ29191.1
Electron transfer flavoprotein beta subunit.
 
  0.844
SDJ39193.1
TIGR03084 family protein.
 
     0.832
SDJ39312.1
enoyl-CoA hydratase.
 
  0.782
SDJ39249.1
Acetyl-CoA carboxylase, carboxyltransferase component.
 
  0.778
SDJ39276.1
propionyl-CoA carboxylase alpha chain.
 
 
  0.771
SDJ39288.1
Acyl-CoA dehydrogenase.
 
    
0.677
Your Current Organism:
Frankineae bacterium MT45
NCBI taxonomy Id: 1882833
Other names: F. bacterium MT45
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