STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ43348.1Proteins of 100 residues with WXG; Belongs to the WXG100 family. (259 aa)    
Predicted Functional Partners:
SDJ43299.1
Conserved DNA-binding protein YbaB; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection; Belongs to the YbaB/EbfC family.
       0.773
SDJ43326.1
Hypothetical protein.
       0.773
SDJ43367.1
EspG family protein.
       0.773
SDJ43191.1
Excreted virulence factor EspC, type VII ESX diderm.
       0.615
SDJ43228.1
Hypothetical protein.
       0.615
SDJ43280.1
Hypothetical protein.
       0.615
SDJ43380.1
Hypothetical protein.
       0.588
SDJ43115.1
DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family.
   
   0.554
SDJ43408.1
Hypothetical protein.
       0.528
SDJ43425.1
Subtilase family protein.
       0.528
Your Current Organism:
Frankineae bacterium MT45
NCBI taxonomy Id: 1882833
Other names: F. bacterium MT45
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.