STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ48363.1Transcriptional regulator, TetR family. (189 aa)    
Predicted Functional Partners:
SDJ48350.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
 
     0.678
SDJ09892.1
Transcriptional regulator, TetR family.
  
     0.538
SDJ09870.1
Nucleoside-diphosphate-sugar epimerase.
  
     0.509
SDJ48383.1
Glycosyl hydrolase family 79, N-terminal domain.
       0.485
SDJ48406.1
GDSL-like Lipase/Acylhydrolase family protein.
       0.432
Your Current Organism:
Frankineae bacterium MT45
NCBI taxonomy Id: 1882833
Other names: F. bacterium MT45
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.