STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ50315.1Nucleoside ABC transporter membrane protein; Belongs to the binding-protein-dependent transport system permease family. (419 aa)    
Predicted Functional Partners:
SDJ50330.1
Nucleoside ABC transporter membrane protein; Belongs to the binding-protein-dependent transport system permease family.
 
0.999
SDJ50290.1
Nucleoside ABC transporter ATP-binding protein.
 
 0.998
SDJ50270.1
Nucleoside-binding protein.
 
 
 0.984
SDJ35800.1
Monosaccharide ABC transporter ATP-binding protein, CUT2 family.
  
  0.630
SDJ25315.1
Monosaccharide ABC transporter ATP-binding protein, CUT2 family.
  
  0.608
SDJ35785.1
D-xylose transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
  
 
  0.578
SDJ50355.1
Phytanoyl-CoA dioxygenase (PhyH).
       0.553
SDJ50391.1
Predicted arabinose efflux permease, MFS family.
  
    0.413
SDJ50253.1
Cytidine deaminase.
 
    0.411
SDJ50413.1
Nicotinamidase-related amidase.
       0.410
Your Current Organism:
Frankineae bacterium MT45
NCBI taxonomy Id: 1882833
Other names: F. bacterium MT45
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