STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APR99667.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (524 aa)    
Predicted Functional Partners:
APR99256.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the CinA family.
     
 0.665
metG
methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
    
  0.565
ctaB
Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.
    
  0.507
APR99466.1
Adventurous gliding motility protein AglS; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.486
APR99467.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.486
APR99469.1
TolR-like protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.486
APS00828.1
Adventurous gliding motility protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.486
APR99881.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.486
APS00031.1
Protein TolR; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.486
APR99335.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
   0.446
Your Current Organism:
Pajaroellobacter abortibovis
NCBI taxonomy Id: 1882918
Other names: P. abortibovis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.