STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRIT1Krev interaction trapped protein 1. (736 aa)    
Predicted Functional Partners:
CCM2
Malcavernin.
    
 
 0.959
ITGB1BP1
Integrin beta-1-binding protein 1.
    
 
 0.958
Z169_16059
Sorting nexin-17.
    
 
 0.854
Z169_07859
Protein HEG 1.
    
 
 0.843
PDCD10
Programmed cell death protein 10.
    
 
 0.707
RAP1A
Ras-related protein Rap-1A.
    
 
 0.662
RAP1B
Ras-related protein Rap-1b.
    
 
 0.662
Z169_14560
Uncharacterized protein C12orf43.
   
    0.457
Z169_00127
Mitogen-activated protein kinase kinase kinase 3.
      
 0.420
SNX27
Sorting nexin-27.
    
 
 0.408
Your Current Organism:
Egretta garzetta
NCBI taxonomy Id: 188379
Other names: E. garzetta, little egret
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.