STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYNCRIPHeterogeneous nuclear ribonucleoprotein Q. (426 aa)    
Predicted Functional Partners:
Z169_00488
Nuclease-sensitive element-binding protein 1.
   
 0.653
HNRNPA2B1
Heterogeneous nuclear ribonucleoproteins A2/B1.
   
0.597
HNRNPH3
Heterogeneous nuclear ribonucleoprotein H3.
   
 0.585
HNRNPU
Heterogeneous nuclear ribonucleoprotein U.
   
 0.577
HNRNPLL
Heterogeneous nuclear ribonucleoprotein L-like.
   
 0.567
HNRNPM
Heterogeneous nuclear ribonucleoprotein M.
   
 0.559
HNRNPH1
Heterogeneous nuclear ribonucleoprotein H.
   
 0.551
TRA2B
Transformer-2 protein beta.
   
 0.536
ARID4A
AT-rich interactive domain-containing protein 4A.
    
 
 0.526
Z169_00595
TATA-binding protein-associated factor 2N.
   
 0.505
Your Current Organism:
Egretta garzetta
NCBI taxonomy Id: 188379
Other names: E. garzetta, little egret
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.