STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANKRD54Ankyrin repeat domain-containing protein 54. (191 aa)    
Predicted Functional Partners:
LIAS
Elp3 domain-containing protein.
     
 0.536
BLOC1S6
Biogenesis of lysosome-related organelles complex 1 subunit 6.
    
 0.514
NOTCH2
Neurogenic locus notch protein 2.
  
  0.509
ANKRD29
Ankyrin repeat domain-containing protein 29.
  
     0.501
NFKBIA
NF-kappa-B inhibitor alpha.
  
     0.500
Z169_05823
Ankyrin repeat and SOCS box protein 13.
  
     0.497
ASB11
Ankyrin repeat and SOCS box protein 11.
  
     0.480
ANKRD16
Ankyrin repeat domain-containing protein 16.
  
     0.479
NOTCH1
Neurogenic locus notch protein 1.
  
  0.474
ASB9
Ankyrin repeat and SOCS box protein 9.
  
     0.459
Your Current Organism:
Egretta garzetta
NCBI taxonomy Id: 188379
Other names: E. garzetta, little egret
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.