STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Z169_14209Chromodomain-helicase-DNA-binding protein 5. (1804 aa)    
Predicted Functional Partners:
ARID4A
AT-rich interactive domain-containing protein 4A.
    
 0.929
MTA3
Metastasis-associated protein MTA3.
   
 0.876
MBD3
Methyl-CpG-binding domain protein 3.
    
 0.862
RBBP4
Histone-binding protein RBBP4.
   
 0.828
RBBP7
Histone-binding protein RBBP7.
   
 0.828
KDM1A
Lysine-specific histone demethylase 1A.
   
 0.725
HDAC3
Histone deacetylase 3.
   
 0.704
HDAC1
Histone deacetylase 1.
   
 0.704
HDAC2
Histone deacetylase 2.
   
 0.704
RCOR1
REST corepressor 1.
    
 0.645
Your Current Organism:
Egretta garzetta
NCBI taxonomy Id: 188379
Other names: E. garzetta, little egret
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.