STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TATDN1Putative deoxyribonuclease TATDN1. (252 aa)    
Predicted Functional Partners:
EXOG
Uncharacterized protein.
      
 0.511
Z169_10078
Mitochondrial inner membrane protein COX18.
  
  
 0.506
EIF3E
Eukaryotic translation initiation factor 3 subunit E; Belongs to the eIF-3 subunit E family.
   
  
 0.496
Z169_07624
PfkB domain-containing protein.
 
      0.468
TPI1
Triosephosphate isomerase.
     
 0.460
UGCG
Ceramide glucosyltransferase.
      0.431
YARS
Tyrosine--tRNA ligase.
  
 
 0.419
Your Current Organism:
Egretta garzetta
NCBI taxonomy Id: 188379
Other names: E. garzetta, little egret
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.