STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Z169_11970Synapsin-3. (315 aa)    
Predicted Functional Partners:
SYN3
Synapsin-3.
 
     0.919
SNAP25
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 0.639
Z169_15808
Synaptobrevin.
   
 0.623
STXBP1
Syntaxin-binding protein 1; Belongs to the STXBP/unc-18/SEC1 family.
   
 
 0.607
Z169_04065
Liprin-alpha-2.
   
 
 0.595
SYT2
Synaptotagmin-2.
   
 0.544
SYT1
Synaptotagmin-1.
   
 0.544
MPP1
55 kDa erythrocyte membrane protein.
   
 
 0.510
Z169_06182
Calcium/calmodulin-dependent protein kinase type II subunit alpha.
   
 0.500
RAB3A
Ras-related protein Rab-3A.
   
 0.488
Your Current Organism:
Egretta garzetta
NCBI taxonomy Id: 188379
Other names: E. garzetta, little egret
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.