STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Z169_11392Granzyme A; Belongs to the peptidase S1 family. (261 aa)    
Predicted Functional Partners:
F2RL3
Proteinase-activated receptor 4; Belongs to the G-protein coupled receptor 1 family.
    
 0.932
F2RL2
Proteinase-activated receptor 3.
    
  0.910
PARD3
Partitioning defective 3.
     
  0.900
MET
Hepatocyte growth factor receptor.
    
 0.686
AGT
Angiotensinogen; Belongs to the serpin family.
  
 0.548
KITLG
Kit ligand.
     
 0.512
BID
BH3-interacting domain death agonist.
    
 0.478
APP
Amyloid beta A4 protein.
    
 0.463
F2
Prothrombin; Thrombin, which cleaves bonds after Arg and Lys, converts fibrinogen to fibrin and activates factors V, VII, VIII, XIII, and, in complex with thrombomodulin, protein C. Functions in blood homeostasis, inflammation and wound healing; Belongs to the peptidase S1 family.
  
 
0.457
MMP9
Matrix metalloproteinase-9.
   
 0.433
Your Current Organism:
Egretta garzetta
NCBI taxonomy Id: 188379
Other names: E. garzetta, little egret
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