STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TGIF2Homeobox protein TGIF2. (106 aa)    
Predicted Functional Partners:
SMAD3
Mothers against decapentaplegic 3.
    
 0.939
TGIF1
Homeobox protein AKR.
  
  
 
0.905
Z169_08378
Pre-B-cell leukemia transcription factor 3.
    
 0.500
PBX4
Pre-B-cell leukemia transcription factor 3.
    
 0.500
PBX1
Pre-B-cell leukemia transcription factor 1.
    
 0.500
CDYL2
Chromodomain Y-like 2.
      
 0.446
TXLNG
Gamma-taxilin.
      
 0.446
ARID4A
AT-rich interactive domain-containing protein 4A.
   
 
 0.426
Z169_13853
Mothers against decapentaplegic homolog.
    
 0.419
HHEX
Hematopoietically-expressed homeobox protein HHEX.
   
 
 0.408
Your Current Organism:
Egretta garzetta
NCBI taxonomy Id: 188379
Other names: E. garzetta, little egret
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.