STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Z169_04004Pre-mRNA cleavage complex 2 protein Pcf11. (1467 aa)    
Predicted Functional Partners:
CSTF3
Cleavage stimulation factor subunit 3.
    
 0.996
CPSF2
Cleavage and polyadenylation specificity factor subunit 2.
   
 0.989
CPSF3
Cleavage and polyadenylation specificity factor subunit 3.
   
 0.985
SYMPK
Symplekin.
    
 0.985
Z169_04779
Cleavage stimulation factor subunit 2.
    
 0.974
Z169_12666
Pre-mRNA 3'-end-processing factor FIP1.
    
 0.947
CPSF4L
Cleavage and polyadenylation specificity factor subunit 4.
    
 0.925
ALYREF
THO complex subunit 4.
    
 0.908
CPSF3L
Integrator complex subunit 11.
   
 0.896
TMEM240
Transmembrane protein 240.
   
 
 0.896
Your Current Organism:
Egretta garzetta
NCBI taxonomy Id: 188379
Other names: E. garzetta, little egret
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.