Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ASH2L | CREBBP | A0A091K114 | A0A091IX75 | Set1/Ash2 histone methyltransferase complex subunit ASH2. | CREB-binding protein. | 0.634 |
ASH2L | KDM6A | A0A091K114 | A0A091JQ65 | Set1/Ash2 histone methyltransferase complex subunit ASH2. | Lysine-specific demethylase 6A. | 0.970 |
ASH2L | RBBP5 | A0A091K114 | A0A091INF2 | Set1/Ash2 histone methyltransferase complex subunit ASH2. | Retinoblastoma-binding protein 5. | 0.998 |
ASH2L | Z169_14868 | A0A091K114 | A0A091IYC4 | Set1/Ash2 histone methyltransferase complex subunit ASH2. | Histone H2A; Belongs to the histone H2A family. | 0.772 |
ASH2L | Z169_15445 | A0A091K114 | A0A091J775 | Set1/Ash2 histone methyltransferase complex subunit ASH2. | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.939 |
ASH2L | Z169_16121 | A0A091K114 | A0A091IQQ1 | Set1/Ash2 histone methyltransferase complex subunit ASH2. | PHD finger protein 7. | 0.652 |
CDYL | EED | A0A091J8I2 | A0A091J1R3 | Chromodomain Y-like. | Polycomb protein EED. | 0.514 |
CDYL | SUZ12 | A0A091J8I2 | A0A091J1Q3 | Chromodomain Y-like. | Polycomb protein SUZ12. | 0.485 |
CDYL | Z169_14868 | A0A091J8I2 | A0A091IYC4 | Chromodomain Y-like. | Histone H2A; Belongs to the histone H2A family. | 0.546 |
CDYL | Z169_15445 | A0A091J8I2 | A0A091J775 | Chromodomain Y-like. | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.642 |
CDYL | Z169_16121 | A0A091J8I2 | A0A091IQQ1 | Chromodomain Y-like. | PHD finger protein 7. | 0.437 |
CREBBP | ASH2L | A0A091IX75 | A0A091K114 | CREB-binding protein. | Set1/Ash2 histone methyltransferase complex subunit ASH2. | 0.634 |
CREBBP | KDM6A | A0A091IX75 | A0A091JQ65 | CREB-binding protein. | Lysine-specific demethylase 6A. | 0.606 |
CREBBP | RBBP5 | A0A091IX75 | A0A091INF2 | CREB-binding protein. | Retinoblastoma-binding protein 5. | 0.640 |
CREBBP | Z169_14868 | A0A091IX75 | A0A091IYC4 | CREB-binding protein. | Histone H2A; Belongs to the histone H2A family. | 0.672 |
CREBBP | Z169_15445 | A0A091IX75 | A0A091J775 | CREB-binding protein. | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.795 |
CREBBP | Z169_16121 | A0A091IX75 | A0A091IQQ1 | CREB-binding protein. | PHD finger protein 7. | 0.551 |
EED | CDYL | A0A091J1R3 | A0A091J8I2 | Polycomb protein EED. | Chromodomain Y-like. | 0.514 |
EED | KDM6A | A0A091J1R3 | A0A091JQ65 | Polycomb protein EED. | Lysine-specific demethylase 6A. | 0.923 |
EED | SUZ12 | A0A091J1R3 | A0A091J1Q3 | Polycomb protein EED. | Polycomb protein SUZ12. | 0.996 |
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