STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UBE2D3Ubiquitin-conjugating enzyme E2 D3; Belongs to the ubiquitin-conjugating enzyme family. (80 aa)    
Predicted Functional Partners:
Z169_03724
Ubiquitin-conjugating enzyme E2 variant 1.
   
 0.998
UBB
Polyubiquitin-C.
   
 0.925
UBE2D1
Ubiquitin-conjugating enzyme E2 D1; Belongs to the ubiquitin-conjugating enzyme family.
  
  
 
0.901
RPS27A
Ubiquitin-40S ribosomal protein S27a.
   
 0.871
Z169_01997
STIP1 homology and U box-containing protein 1.
   
 0.867
Z169_12074
RING-box protein 1.
   
 0.836
CUL3
Cullin-3; Belongs to the cullin family.
   
 0.781
BIRC6
Baculoviral IAP repeat-containing protein 6.
   
0.770
UBE2K
Ubiquitin-conjugating enzyme E2 K; Belongs to the ubiquitin-conjugating enzyme family.
   
0.769
UBA6
Ubiquitin-like modifier-activating enzyme 6.
   
 0.762
Your Current Organism:
Egretta garzetta
NCBI taxonomy Id: 188379
Other names: E. garzetta, little egret
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.