STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Z169_12013Caspase recruitment domain-containing protein 10. (971 aa)    
Predicted Functional Partners:
MALT1
Mucosa-associated lymphoid tissue lymphoma translocation protein 1.
    
 0.723
Z169_15915
Intersectin-2.
   
  0.628
Z169_02105
Glutamate receptor ionotropic, NMDA 1.
   
 0.617
Z169_12477
SH3 and multiple ankyrin repeat domains protein 3.
   
 0.611
Z169_12478
SH3 and multiple ankyrin repeat domains protein 3.
   
 0.611
Z169_06182
Calcium/calmodulin-dependent protein kinase type II subunit alpha.
    
 0.576
Z169_09533
Adenine phosphoribosyltransferase.
  
 
 0.563
Z169_06481
Mucosa-associated lymphoid tissue lymphoma translocation protein 1.
    
 0.535
Z169_03724
Ubiquitin-conjugating enzyme E2 variant 1.
    
  0.509
POLR2F
DNA-directed RNA polymerases I, II, and III subunit RPABC2.
  
  
 0.506
Your Current Organism:
Egretta garzetta
NCBI taxonomy Id: 188379
Other names: E. garzetta, little egret
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