STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHF20L1PHD finger protein 20-like 1. (166 aa)    
Predicted Functional Partners:
Z169_06397
Fanconi anemia group M protein.
    
 0.829
Z169_06662
Zinc finger protein 280D.
   
 0.576
HMG20A
High mobility group protein 20A.
    
 
 0.534
ANKMY2
Ankyrin repeat and MYND domain-containing protein 2.
    
 
 0.462
TSPAN13
Tetraspanin-13; Belongs to the tetraspanin (TM4SF) family.
     
 0.455
LIN54
Protein lin-54.
   
 0.443
CENPT
Centromere protein T.
    
 0.423
LIN9
Protein lin-9.
    
 0.400
Your Current Organism:
Egretta garzetta
NCBI taxonomy Id: 188379
Other names: E. garzetta, little egret
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.