STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPS15A40S ribosomal protein S15a; Belongs to the universal ribosomal protein uS8 family. (135 aa)    
Predicted Functional Partners:
RPS11
40S ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family.
  
 0.989
RPS3
40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
  
 0.989
RPS16
40S ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family.
  
 0.989
Z169_08289
Ribosomal_S7 domain-containing protein.
  
 0.989
Z169_16227
40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
  
 0.989
RPS13
40S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family.
   
 0.988
EIF1AX
Eukaryotic translation initiation factor 1A, Y-chromosomal; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits.
  
 0.987
RPS3A
40S ribosomal protein S3a.
   
 0.987
RPS8
40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.
   
 0.987
RPS6
40S ribosomal protein S6.
   
 0.987
Your Current Organism:
Egretta garzetta
NCBI taxonomy Id: 188379
Other names: E. garzetta, little egret
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