STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MESTMesoderm-specific transcript protein. (246 aa)    
Predicted Functional Partners:
AASDH
Acyl-CoA synthetase family member 4.
    
 0.601
CEP41
Centrosomal protein of 41 kDa.
      
 0.526
PALB2
Partner and localizer of BRCA2.
  
 0.524
Z169_14793
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 0.524
DRAM1
DNA damage-regulated autophagy modulator protein 1.
      
 0.491
LRGUK
Leucine-rich repeat and guanylate kinase domain-containing protein.
   
 
 0.476
ALDH18A1
Delta-1-pyrroline-5-carboxylate synthase.
     
 0.459
PEX5L
PEX5-related protein.
   
 0.457
OXCT1
Uncharacterized protein.
  
 
 0.417
ISOC1
Isochorismatase domain-containing protein 1.
  
 0.414
Your Current Organism:
Egretta garzetta
NCBI taxonomy Id: 188379
Other names: E. garzetta, little egret
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.