STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUL3Cullin-3; Belongs to the cullin family. (746 aa)    
Predicted Functional Partners:
Z169_12074
RING-box protein 1.
    
 0.998
SPOPL
Speckle-type POZ protein-like.
   
 0.998
SKP1
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
   
 0.998
CAND1
Cullin-associated NEDD8-dissociated protein 1.
   
 0.989
SKP2
S-phase kinase-associated protein 2.
    
 0.985
UBXN7
UBX domain-containing protein 7.
   
 0.978
KLHL17
Kelch-like 17.
    
 0.975
Z169_15473
F-box/WD repeat-containing protein 7.
    
 0.973
Z169_10725
Lysine-specific demethylase 2B.
    
 0.969
SUFU
Suppressor of fused.
     
 0.965
Your Current Organism:
Egretta garzetta
NCBI taxonomy Id: 188379
Other names: E. garzetta, little egret
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.