STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
INIPSOSS complex subunit C. (96 aa)    
Predicted Functional Partners:
INTS3
Integrator complex subunit 3.
    
 
 0.991
Z169_09954
Tripartite motif-containing protein 7.
      
 0.514
MGAT4B
Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B.
      
 0.512
POMK
Protein O-mannose kinase.
      
 0.507
Z169_07613
Uncharacterized protein.
      
 0.493
Z169_13999
Specifically androgen-regulated gene protein.
      
 0.446
RBBP8
DNA endonuclease RBBP8.
      
 0.445
RBBP5
Retinoblastoma-binding protein 5.
   
    0.440
Your Current Organism:
Egretta garzetta
NCBI taxonomy Id: 188379
Other names: E. garzetta, little egret
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.