STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLTCClathrin heavy chain 1. (1662 aa)    
Predicted Functional Partners:
DNAJC6
Putative tyrosine-protein phosphatase auxilin.
   
 0.999
CLTB
Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.
   
 0.995
Z169_15915
Intersectin-2.
   
 0.973
ITSN1
Intersectin-1.
    
 0.972
SORL1
Sortilin-related receptor.
    
 0.952
Z169_14033
Growth arrest-specific protein 7.
   
 0.948
AP1B1
AP complex subunit beta.
   
 0.929
AP1G1
AP-1 complex subunit gamma.
   
 0.927
Z169_11359
Clathrin heavy chain 1.
  
  
 
0.905
MYO9A
Unconventional myosin-IXa; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
     
 0.902
Your Current Organism:
Egretta garzetta
NCBI taxonomy Id: 188379
Other names: E. garzetta, little egret
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.