STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PPP1R42Protein phosphatase 1 regulatory subunit 42. (255 aa)    
Predicted Functional Partners:
COPS4
COP9 signalosome complex subunit 4.
   
 0.965
COPS2
COP9 signalosome complex subunit 2.
   
 0.961
COPS8
COP9 signalosome complex subunit 8.
   
 0.958
COPS3
COP9 signalosome complex subunit 3.
   
 0.956
GPS1
COP9 signalosome complex subunit 1.
   
 0.956
UBXN7
UBX domain-containing protein 7.
   
 0.915
DDB1
DNA damage-binding protein 1.
    
 0.863
PSMD12
26S proteasome non-ATPase regulatory subunit 12.
   
 0.863
CUL2
Cullin-2; Belongs to the cullin family.
   
 0.855
Z169_12074
RING-box protein 1.
   
 0.850
Your Current Organism:
Egretta garzetta
NCBI taxonomy Id: 188379
Other names: E. garzetta, little egret
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.