STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Z169_08582Transient receptor potential cation channel subfamily M member 6. (2027 aa)    
Predicted Functional Partners:
ATOX1
Copper transport protein ATOX1.
      
 0.693
FTH1
Ferritin; Stores iron in a soluble, non-toxic, readily available form. Important for iron homeostasis. Iron is taken up in the ferrous form and deposited as ferric hydroxides after oxidation.
      
 0.693
TRPC1
Short transient receptor potential channel 1.
    
0.542
PDLIM3
PDZ and LIM domain protein 3.
   
  
 0.508
ADCY1
Adenylate cyclase type 1.
      
 0.497
Z169_01642
Ferritin; Stores iron in a soluble, non-toxic, readily available form. Important for iron homeostasis. Iron is taken up in the ferrous form and deposited as ferric hydroxides after oxidation.
      
 0.489
NUDT9
Nudix hydrolase domain-containing protein.
 
   
 0.461
MRS2
Magnesium transporter.
      
 0.452
VDAC2
Voltage-dependent anion-selective channel protein 2.
    
 
 0.450
CCKAR
Cholecystokinin receptor type A; Belongs to the G-protein coupled receptor 1 family.
      
 0.446
Your Current Organism:
Egretta garzetta
NCBI taxonomy Id: 188379
Other names: E. garzetta, little egret
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