STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERGIC2Endoplasmic reticulum-Golgi intermediate compartment protein 2. (377 aa)    
Predicted Functional Partners:
ERGIC3
Endoplasmic reticulum-Golgi intermediate compartment protein 3.
   
 
0.991
DERL3
Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family.
   
 
 0.805
DERL2
Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family.
   
 
 0.805
SEL1L
Protein sel-1 1.
   
 
 0.801
SEL1L3
Protein sel-1 3.
   
   0.799
YARS
Tyrosine--tRNA ligase.
     
 0.728
ACO2
Aconitate hydratase, mitochondrial; Belongs to the aconitase/IPM isomerase family.
 
    
 0.631
TRMU
Mitochondrial tRNA-specific 2-thiouridylase 1.
  
 0.541
GTSE1
G2 and S phase-expressed protein 1.
  
 0.541
EPRS
Bifunctional glutamate/proline--tRNA ligase.
  
  
 0.539
Your Current Organism:
Egretta garzetta
NCBI taxonomy Id: 188379
Other names: E. garzetta, little egret
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