STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGO3Protein argonaute-3. (848 aa)    
Predicted Functional Partners:
DICER1
Endoribonuclease Dicer; Belongs to the helicase family. Dicer subfamily.
   
 0.951
DROSHA
Ribonuclease 3.
   
 0.840
TNRC6A
Trinucleotide repeat-containing gene 6A protein.
    
 0.821
TNRC6C
Trinucleotide repeat-containing gene 6C protein.
    
 0.821
Z169_05578
Double-stranded RNA-binding protein Staufen 2.
    
 0.780
STAU1
Double-stranded RNA-binding protein Staufen 1.
    
 0.780
MRPL44
Uncharacterized protein.
   
 0.773
UBXN7
UBX domain-containing protein 7.
   
 0.723
LPAR5
Lysophosphatidic acid receptor 5; Belongs to the G-protein coupled receptor 1 family.
    
 0.722
TSN
Translin.
   
 0.711
Your Current Organism:
Egretta garzetta
NCBI taxonomy Id: 188379
Other names: E. garzetta, little egret
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.