Z169_08101 protein (Egretta garzetta) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

Z169_08101

Run domain Beclin-1 interacting and cysteine-rich containing protein. (945 aa)

Predicted Functional Partners:

UVRAG

0.945

PIK3C3

0.919

PIK3R4

0.756

RAB7A

0.682

GLIPR2

0.483

OSTM1

0.446

NRBF2

0.414

Your Current Organism:

Egretta garzetta

NCBI taxonomy Id: 188379
Other names: E. garzetta, little egret

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
GLIPR2	Z169_08101	A0A091JGS3	A0A091J0B1	Golgi-associated plant pathogenesis-related protein 1.	Run domain Beclin-1 interacting and cysteine-rich containing protein.	0.483
NRBF2	PIK3C3	A0A091J3N1	A0A091JU29	Nuclear receptor-binding factor 2.	Phosphatidylinositol 3-kinase catalytic subunit type 3; Belongs to the PI3/PI4-kinase family.	0.996
NRBF2	PIK3R4	A0A091J3N1	A0A091K046	Nuclear receptor-binding factor 2.	Phosphoinositide 3-kinase regulatory subunit 4.	0.964
NRBF2	UVRAG	A0A091J3N1	A0A091J430	Nuclear receptor-binding factor 2.	UV radiation resistance-associated gene protein.	0.550
NRBF2	Z169_08101	A0A091J3N1	A0A091J0B1	Nuclear receptor-binding factor 2.	Run domain Beclin-1 interacting and cysteine-rich containing protein.	0.414
OSTM1	Z169_08101	A0A091JJX7	A0A091J0B1	Osteopetrosis-associated transmembrane protein 1.	Run domain Beclin-1 interacting and cysteine-rich containing protein.	0.446
PIK3C3	NRBF2	A0A091JU29	A0A091J3N1	Phosphatidylinositol 3-kinase catalytic subunit type 3; Belongs to the PI3/PI4-kinase family.	Nuclear receptor-binding factor 2.	0.996
PIK3C3	PIK3R4	A0A091JU29	A0A091K046	Phosphatidylinositol 3-kinase catalytic subunit type 3; Belongs to the PI3/PI4-kinase family.	Phosphoinositide 3-kinase regulatory subunit 4.	0.999
PIK3C3	UVRAG	A0A091JU29	A0A091J430	Phosphatidylinositol 3-kinase catalytic subunit type 3; Belongs to the PI3/PI4-kinase family.	UV radiation resistance-associated gene protein.	0.992
PIK3C3	Z169_08101	A0A091JU29	A0A091J0B1	Phosphatidylinositol 3-kinase catalytic subunit type 3; Belongs to the PI3/PI4-kinase family.	Run domain Beclin-1 interacting and cysteine-rich containing protein.	0.919
PIK3R4	NRBF2	A0A091K046	A0A091J3N1	Phosphoinositide 3-kinase regulatory subunit 4.	Nuclear receptor-binding factor 2.	0.964
PIK3R4	PIK3C3	A0A091K046	A0A091JU29	Phosphoinositide 3-kinase regulatory subunit 4.	Phosphatidylinositol 3-kinase catalytic subunit type 3; Belongs to the PI3/PI4-kinase family.	0.999
PIK3R4	UVRAG	A0A091K046	A0A091J430	Phosphoinositide 3-kinase regulatory subunit 4.	UV radiation resistance-associated gene protein.	0.988
PIK3R4	Z169_08101	A0A091K046	A0A091J0B1	Phosphoinositide 3-kinase regulatory subunit 4.	Run domain Beclin-1 interacting and cysteine-rich containing protein.	0.756
RAB7A	Z169_08101	A0A091J6P5	A0A091J0B1	Ras-related protein Rab-7a.	Run domain Beclin-1 interacting and cysteine-rich containing protein.	0.682
UVRAG	NRBF2	A0A091J430	A0A091J3N1	UV radiation resistance-associated gene protein.	Nuclear receptor-binding factor 2.	0.550
UVRAG	PIK3C3	A0A091J430	A0A091JU29	UV radiation resistance-associated gene protein.	Phosphatidylinositol 3-kinase catalytic subunit type 3; Belongs to the PI3/PI4-kinase family.	0.992
UVRAG	PIK3R4	A0A091J430	A0A091K046	UV radiation resistance-associated gene protein.	Phosphoinositide 3-kinase regulatory subunit 4.	0.988
UVRAG	Z169_08101	A0A091J430	A0A091J0B1	UV radiation resistance-associated gene protein.	Run domain Beclin-1 interacting and cysteine-rich containing protein.	0.945
Z169_08101	GLIPR2	A0A091J0B1	A0A091JGS3	Run domain Beclin-1 interacting and cysteine-rich containing protein.	Golgi-associated plant pathogenesis-related protein 1.	0.483