STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FANCEFanconi anemia group E protein. (471 aa)    
Predicted Functional Partners:
Z169_06397
Fanconi anemia group M protein.
    
 0.999
RPL5
60S ribosomal protein L5.
  
 0.988
RPL35
60S ribosomal protein L35.
  
 0.988
RPL23A
60S ribosomal protein L23a; Belongs to the universal ribosomal protein uL23 family.
  
 0.988
RPL30
60S ribosomal protein L30.
   
 0.986
RPS16
40S ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family.
  
 0.986
Z169_03440
60S ribosomal protein L17; Belongs to the universal ribosomal protein uL22 family.
  
 0.986
FANCB
Fanconi anemia group B protein.
    
 0.986
RPL13
60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family.
   
 0.985
FANCD2
Fanconi anemia group D2 protein.
    
 0.985
Your Current Organism:
Egretta garzetta
NCBI taxonomy Id: 188379
Other names: E. garzetta, little egret
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.