STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Z169_07775Pre-mRNA-splicing factor CWC25. (417 aa)    
Predicted Functional Partners:
Z169_13360
Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16.
    
 0.996
CDC40
Pre-mRNA-processing factor 17.
    
 0.994
CCDC94
Coiled-coil domain-containing protein 94.
   
 0.989
CDC5L
Cell division cycle 5-like.
    
 
 0.988
BUD31
Protein BUD31.
    
 
 0.983
CWC22
Pre-mRNA-splicing factor CWC22.
   
 0.978
SYF2
Pre-mRNA-splicing factor syf2.
   
 0.968
SNRNP48
U11/U12 small nuclear ribonucleoprotein 48 kDa protein.
   
 0.950
ISY1
Pre-mRNA-splicing factor ISY1.
   
 
 0.940
WDR25
WD repeat-containing protein 25.
    
 0.940
Your Current Organism:
Egretta garzetta
NCBI taxonomy Id: 188379
Other names: E. garzetta, little egret
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.