STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NIT2Omega-amidase NIT2. (272 aa)    
Predicted Functional Partners:
GLUD1
ELFV_dehydrog domain-containing protein; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
 
 0.953
SRM
Spermidine synthase; Belongs to the spermidine/spermine synthase family.
 
 
 0.931
DDO
D-aspartate oxidase.
   
 
 0.914
GOT2
Aspartate aminotransferase.
     
 0.910
RPL31
60S ribosomal protein L31.
 
      0.900
IDH1
Isocitrate dehydrogenase [NADP] cytoplasmic.
  
 
  0.837
MDH2
Malate dehydrogenase.
  
 
 0.829
MDH1
Malate dehydrogenase.
  
 
 0.811
ACLY
ATP-citrate synthase.
  
 
  0.811
Z169_11860
Iso_dh domain-containing protein.
   
 
 0.810
Your Current Organism:
Egretta garzetta
NCBI taxonomy Id: 188379
Other names: E. garzetta, little egret
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.