STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HENMT1Small RNA 2'-O-methyltransferase. (378 aa)    
Predicted Functional Partners:
DICER1
Endoribonuclease Dicer; Belongs to the helicase family. Dicer subfamily.
   
 
 0.638
Z169_15029
Gametocyte-specific factor 1.
      
 0.570
ASZ1
Ankyrin repeat, SAM and basic leucine zipper domain-containing protein 1.
     
 0.548
AKAP1
Tudor domain-containing protein.
     
 0.538
FKBP6
Peptidylprolyl isomerase.
      
 0.513
PIWIL1
Piwi-like 1; Belongs to the argonaute family.
    
 0.499
Z169_08875
Piwi-like 2.
    
 0.499
AGO4
Protein argonaute-4.
      
 0.446
AGO3
Protein argonaute-3.
      
 0.446
PNLDC1
Poly(A)-specific ribonuclease PARN-like domain-containing protein 1.
      
 0.446
Your Current Organism:
Egretta garzetta
NCBI taxonomy Id: 188379
Other names: E. garzetta, little egret
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.