STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTPRFReceptor-type tyrosine-protein phosphatase F. (1863 aa)    
Predicted Functional Partners:
INSR
Tyrosine-protein kinase receptor.
    
 
0.937
CTNNB1
Catenin beta-1.
   
 0.917
IRS1
Insulin receptor substrate 1.
    
  0.909
NTRK2
Tyrosine-protein kinase receptor.
   
 0.804
Z169_08121
Interleukin-1 receptor accessory protein.
    
 0.709
SLITRK1
SLIT and NTRK-like 1.
    
 0.668
IL1RAPL2
X-linked interleukin-1 receptor accessory protein-like 2.
    
 0.649
LRFN5
Leucine-rich repeat and fibronectin type-III domain-containing protein 5.
    
 0.616
Z169_04065
Liprin-alpha-2.
    
 0.603
Z169_12918
Leucine-rich repeat and fibronectin type III domain-containing protein 1-like.
   
 0.591
Your Current Organism:
Egretta garzetta
NCBI taxonomy Id: 188379
Other names: E. garzetta, little egret
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.