STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERI3ERI1 exoribonuclease 3. (241 aa)    
Predicted Functional Partners:
SPCS2
Signal peptidase complex subunit 2.
      
 0.620
ORC2
Origin recognition complex subunit 2.
      
 0.604
Z169_09710
tRNA-dihydrouridine(47) synthase [NAD(P)(+)].
 
 
    0.589
Z169_02218
E3 ubiquitin-protein ligase RNF220.
      
 0.533
LANCL1
LanC-like 1.
      
 0.506
TDP1
Tyrosyl-DNA phosphodiesterase 1.
      
 0.505
TMEM53
Transmembrane protein 53-B.
      
 0.499
DCP1A
mRNA-decapping enzyme 1A.
      
 0.480
CIRH1A
Cirhin.
   
  
 0.465
SIN3B
Paired amphipathic helix protein Sin3b.
      
 0.446
Your Current Organism:
Egretta garzetta
NCBI taxonomy Id: 188379
Other names: E. garzetta, little egret
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.