STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FBXL7F-box/LRR-repeat protein 7. (467 aa)    
Predicted Functional Partners:
SKP1
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
   
 0.913
Z169_12074
RING-box protein 1.
    
 0.846
CUL3
Cullin-3; Belongs to the cullin family.
    
 0.832
UBB
Polyubiquitin-C.
   
 0.693
CAND1
Cullin-associated NEDD8-dissociated protein 1.
    
 0.668
RPS27A
Ubiquitin-40S ribosomal protein S27a.
    
 0.663
Z169_06548
COMM domain-containing protein 4.
    
 0.637
NAE1
NEDD8-activating enzyme E1 regulatory subunit.
     
 0.597
UBA3
NEDD8-activating enzyme E1 catalytic subunit.
     
 0.597
UBE2F
NEDD8-conjugating enzyme UBE2F; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.591
Your Current Organism:
Egretta garzetta
NCBI taxonomy Id: 188379
Other names: E. garzetta, little egret
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.