STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FBXO43F-box only protein 43. (668 aa)    
Predicted Functional Partners:
Z169_15059
Cell division cycle protein 20.
   
 0.961
SKP1
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
    
 0.936
BTRC
F-box/WD repeat-containing protein 1A.
     
 0.913
FBXW11
F-box/WD repeat-containing protein 11.
     
 0.910
PPP2CB
Serine/threonine-protein phosphatase.
    
  0.901
PPP2CA
Serine/threonine-protein phosphatase.
    
  0.901
FDFT1
Squalene synthase.
   
 0.718
SIGMAR1
Sigma non-opioid intracellular receptor 1.
   
 0.691
PLK2
Serine/threonine-protein kinase PLK2.
   
 0.663
PLK3
Serine/threonine-protein kinase PLK3.
   
 0.663
Your Current Organism:
Egretta garzetta
NCBI taxonomy Id: 188379
Other names: E. garzetta, little egret
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