STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Z169_04626Vacuolar fusion protein MON1 A. (541 aa)    
Predicted Functional Partners:
CCZ1
Vacuolar fusion protein CCZ1.
    
 0.998
VPS41
Vacuolar protein sorting-associated protein 41.
    
 
 0.947
RAB7A
Ras-related protein Rab-7a.
    
 0.888
RAB9B
Ras-related protein Rab-9B.
    
 0.869
RAB9A
Ras-related protein Rab-9A.
    
 0.869
MAU2
MAU2 chromatid cohesion factor.
 
 
    0.865
RAB7B
Ras-related protein Rab-7b.
    
 0.810
GDI2
Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family.
   
 0.806
VPS39
Vam6/Vps39-like.
   
 
 0.783
VPS11
Vacuolar protein sorting-associated protein 11.
    
 
 0.775
Your Current Organism:
Egretta garzetta
NCBI taxonomy Id: 188379
Other names: E. garzetta, little egret
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.