STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Z169_10683U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 2. (461 aa)    
Predicted Functional Partners:
SRSF2
Serine/arginine-rich splicing factor 2.
   
0.844
SNRNP35
U11/U12 small nuclear ribonucleoprotein 35 kDa protein.
   
 0.766
SNRNP48
U11/U12 small nuclear ribonucleoprotein 48 kDa protein.
   
 
 0.713
Z169_02591
DNA-directed RNA polymerases I, II, and III subunit RPABC4.
     
 0.700
RNPC3
RNA-binding protein 40.
   
 
 0.692
RNPS1
RNA-binding protein with serine-rich domain 1.
 
 
 0.689
Z169_08764
Serine/arginine-rich splicing factor 7.
   
 0.671
SRSF7
Serine/arginine-rich splicing factor 7.
   
 0.671
SF3B1
Splicing factor 3B subunit 1.
   
 
 0.633
Z169_13360
Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16.
    
  0.611
Your Current Organism:
Egretta garzetta
NCBI taxonomy Id: 188379
Other names: E. garzetta, little egret
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