LSM7 protein (Egretta garzetta) - STRING interaction network

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Score

LSM7

U6 snRNA-associated Sm-like LSm7. (101 aa)

Predicted Functional Partners:

LSM5

0.999

LSM3

0.999

LSM4

0.999

LSM6

0.999

LSM8

0.999

LSM1

0.998

Z169_06497

0.997

SNRPD3

0.995

DDX6

0.994

SART3

0.986

Your Current Organism:

Egretta garzetta

NCBI taxonomy Id: 188379
Other names: E. garzetta, little egret

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DDX6	LSM1	A0A091ISX1	A0A091J706	Putative ATP-dependent RNA helicase DDX6.	U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs.	0.996
DDX6	LSM3	A0A091ISX1	A0A091J8Y1	Putative ATP-dependent RNA helicase DDX6.	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.832
DDX6	LSM4	A0A091ISX1	A0A091JIN6	Putative ATP-dependent RNA helicase DDX6.	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.925
DDX6	LSM5	A0A091ISX1	A0A091IZZ0	Putative ATP-dependent RNA helicase DDX6.	U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA.	0.694
DDX6	LSM6	A0A091ISX1	A0A091JJM7	Putative ATP-dependent RNA helicase DDX6.	U6 snRNA-associated Sm-like LSm6.	0.734
DDX6	LSM7	A0A091ISX1	A0A091J8J7	Putative ATP-dependent RNA helicase DDX6.	U6 snRNA-associated Sm-like LSm7.	0.994
DDX6	SNRPD3	A0A091ISX1	A0A091JIC5	Putative ATP-dependent RNA helicase DDX6.	Small nuclear ribonucleoprotein Sm D3.	0.413
DDX6	Z169_06497	A0A091ISX1	A0A091JJG2	Putative ATP-dependent RNA helicase DDX6.	Protein PAT1 2.	0.996
LSM1	DDX6	A0A091J706	A0A091ISX1	U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs.	Putative ATP-dependent RNA helicase DDX6.	0.996
LSM1	LSM3	A0A091J706	A0A091J8Y1	U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs.	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.998
LSM1	LSM4	A0A091J706	A0A091JIN6	U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs.	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.998
LSM1	LSM5	A0A091J706	A0A091IZZ0	U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs.	U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA.	0.998
LSM1	LSM6	A0A091J706	A0A091JJM7	U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs.	U6 snRNA-associated Sm-like LSm6.	0.998
LSM1	LSM7	A0A091J706	A0A091J8J7	U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs.	U6 snRNA-associated Sm-like LSm7.	0.998
LSM1	LSM8	A0A091J706	A0A091JNL9	U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs.	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.976
LSM1	SART3	A0A091J706	A0A091JBQ1	U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs.	Squamous cell carcinoma antigen recognized by T-cells 3.	0.516
LSM1	SNRPD3	A0A091J706	A0A091JIC5	U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs.	Small nuclear ribonucleoprotein Sm D3.	0.707
LSM1	Z169_06497	A0A091J706	A0A091JJG2	U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs.	Protein PAT1 2.	0.998
LSM3	DDX6	A0A091J8Y1	A0A091ISX1	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Putative ATP-dependent RNA helicase DDX6.	0.832
LSM3	LSM1	A0A091J8Y1	A0A091J706	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs.	0.998