STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Z169_04522Deoxyribonuclease gamma. (315 aa)    
Predicted Functional Partners:
SIN3B
Paired amphipathic helix protein Sin3b.
    
 
 0.513
Z169_13992
Inhibitor of nuclear factor kappa-B kinase subunit epsilon.
    
 0.446
TBK1
Serine/threonine-protein kinase TBK1.
    
 0.446
CHUK
Inhibitor of nuclear factor kappa-B kinase subunit alpha.
    
 0.446
IKBKB
Inhibitor of nuclear factor kappa-B kinase subunit beta.
    
 0.446
UBB
Polyubiquitin-C.
   
 0.405
LAMTOR2
Ragulator complex protein LAMTOR2.
    
 0.401
ALDH18A1
Delta-1-pyrroline-5-carboxylate synthase.
      
 0.400
Your Current Organism:
Egretta garzetta
NCBI taxonomy Id: 188379
Other names: E. garzetta, little egret
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.