STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Z169_04562Semaphorin-3B. (369 aa)    
Predicted Functional Partners:
NRP1
Neuropilin-1.
    
 0.871
MET
Hepatocyte growth factor receptor.
    
 0.659
PLXNA1
Plexin-A1.
    
 0.560
PLXNA4
Plexin-A4.
    
 0.548
Z169_15520
Plexin-A2.
    
 0.520
Z169_05842
Plexin-A4.
    
 0.520
FER
Tyrosine-protein kinase; Belongs to the protein kinase superfamily. Tyr protein kinase family. Fes/fps subfamily.
     
 0.512
CRMP1
Dihydropyrimidinase-related protein 1.
     
 0.493
Z169_16177
Plexin-B1.
    
 0.489
FARP1
FERM, RhoGEF and pleckstrin domain-containing protein 1.
     
 0.486
Your Current Organism:
Egretta garzetta
NCBI taxonomy Id: 188379
Other names: E. garzetta, little egret
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.