STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DGCR8Microprocessor complex subunit DGCR8. (775 aa)    
Predicted Functional Partners:
DROSHA
Ribonuclease 3.
   
 0.989
DICER1
Endoribonuclease Dicer; Belongs to the helicase family. Dicer subfamily.
   
 0.896
MRPL44
Uncharacterized protein.
   
 0.780
DDX17
Putative ATP-dependent RNA helicase DDX17; Belongs to the DEAD box helicase family.
    
 
 0.734
DDX5
Putative ATP-dependent RNA helicase DDX5; Belongs to the DEAD box helicase family.
    
 
 0.726
XPO5
Exportin-5.
   
  
 0.709
METTL14
Methyltransferase-like 14; Belongs to the MT-A70-like family.
   
  
 0.701
HNRNPA2B1
Heterogeneous nuclear ribonucleoproteins A2/B1.
      
 0.692
RANBP1
Ran-specific GTPase-activating protein.
 
    
 0.564
LIN28B
Protein lin-28 B.
      
 0.518
Your Current Organism:
Egretta garzetta
NCBI taxonomy Id: 188379
Other names: E. garzetta, little egret
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.