STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NBASNeuroblastoma-amplified sequence. (2334 aa)    
Predicted Functional Partners:
ZW10
Centromere/kinetochore protein zw10.
    
 0.998
RINT1
RAD50-interacting protein 1.
    
 0.990
STX18
Syntaxin-18.
    
 0.981
RPS6KC1
Ribosomal protein S6 kinase delta-1.
   
 0.953
NAPG
Gamma-soluble NSF attachment protein.
    
 0.819
BNIP1
Vesicle transport protein SEC20.
   
 0.785
SEC22B
Vesicle-trafficking protein SEC22b; Belongs to the synaptobrevin family.
    
 0.776
ARCN1
Coatomer subunit delta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.
    
 0.691
SEC22C
Vesicle-trafficking protein SEC22c; Belongs to the synaptobrevin family.
    
 0.682
SEC22A
Vesicle-trafficking protein SEC22a; Belongs to the synaptobrevin family.
    
 0.682
Your Current Organism:
Egretta garzetta
NCBI taxonomy Id: 188379
Other names: E. garzetta, little egret
Server load: low (12%) [HD]