STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Z169_00127Mitogen-activated protein kinase kinase kinase 3. (618 aa)    
Predicted Functional Partners:
CCM2
Malcavernin.
    
 0.949
MAP2K5
Dual specificity mitogen-activated protein kinase kinase 5; Belongs to the protein kinase superfamily.
  
0.935
TRAF6
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
   
 0.812
SQSTM1
Sequestosome-1.
    
 0.736
SRF
MADS-box domain-containing protein.
    
 0.651
MAP2K4
Dual specificity mitogen-activated protein kinase kinase 4; Belongs to the protein kinase superfamily.
   
0.649
SMYD3
Histone-lysine N-methyltransferase SMYD3.
   
 
 0.619
Z169_00135
Next to BRCA1 1.
    
 0.609
GSAP
Gamma-secretase-activating protein.
    
 0.569
MAP2K2
Dual specificity mitogen-activated protein kinase kinase 2; Belongs to the protein kinase superfamily.
   
0.545
Your Current Organism:
Egretta garzetta
NCBI taxonomy Id: 188379
Other names: E. garzetta, little egret
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