STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Z169_10500Clathrin coat assembly protein AP180. (695 aa)    
Predicted Functional Partners:
Z169_15915
Intersectin-2.
    
 0.960
ITSN1
Intersectin-1.
    
 0.942
AP2M1
AP-2 complex subunit mu; Belongs to the adaptor complexes medium subunit family.
    
 0.702
DNAJC6
Putative tyrosine-protein phosphatase auxilin.
   
 0.699
RPS27A
Ubiquitin-40S ribosomal protein S27a.
    
  0.695
SORL1
Sortilin-related receptor.
     
 0.680
CLTB
Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.
    
 0.669
Z169_15808
Synaptobrevin.
    
 0.658
STON2
Stonin-2.
    
 0.656
UBB
Polyubiquitin-C.
    
  0.646
Your Current Organism:
Egretta garzetta
NCBI taxonomy Id: 188379
Other names: E. garzetta, little egret
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.