STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APOLD1Apolipoprotein L domain-containing protein 1. (226 aa)    
Predicted Functional Partners:
Z169_06397
Fanconi anemia group M protein.
    
 0.829
BICC1
Protein bicaudal C 1.
      
 0.506
SDK1
Protein sidekick-1.
    
 
 0.496
SLC35F1
Solute carrier family 35 member F1.
      
 0.491
Z169_14539
Retinoic acid-induced protein 3.
     
 0.448
LIN52
Protein lin-52.
    
 0.433
LIN54
Protein lin-54.
    
 0.431
CENPT
Centromere protein T.
    
 0.423
LIN9
Protein lin-9.
    
 0.413
Your Current Organism:
Egretta garzetta
NCBI taxonomy Id: 188379
Other names: E. garzetta, little egret
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.