STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PDS5ASister chromatid cohesion protein PDS5 A. (1325 aa)    
Predicted Functional Partners:
SMC3
Structural maintenance of chromosomes protein 3.
   
 0.976
WAPAL
Wings apart-like.
   
 0.958
NIPBL
Nipped-B protein.
   
 0.906
SMC4
Structural maintenance of chromosomes protein 4.
   
 0.882
ESCO1
N-acetyltransferase ESCO1.
   
 0.882
RAD21
Double-strand-break repair protein rad21.
   
 0.872
RAD21L1
Double-strand-break repair protein rad21-like 1.
   
 0.872
Z169_04674
N-acetyltransferase ESCO2.
   
 0.859
MAU2
MAU2 chromatid cohesion factor.
   
 
 0.831
PDS5B
Sister chromatid cohesion protein PDS5 B.
  
0.786
Your Current Organism:
Egretta garzetta
NCBI taxonomy Id: 188379
Other names: E. garzetta, little egret
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.